Instantiate a specific number of agents per patch. The user can either supply a table of how many to initiate in each patch, linked by a column in that table called pops.

specificNumPerPatch(patches, numPerPatchTable = NULL, numPerPatchMap = NULL)

Arguments

patches

RasterLayer of patches, with some sort of a patch id.

numPerPatchTable

A data.frame or data.table with a column named pops that matches the patches patch ids, and a second column num.in.pop with population size in each patch.

numPerPatchMap

A RasterLayer exactly the same as patches but with agent numbers rather than ids as the cell values per patch.

Value

A raster with 0s and 1s, where the 1s indicate starting locations of agents following the numbers above.

Examples

library(data.table) library(raster) library(quickPlot) set.seed(1234) Ntypes <- 4 ras <- randomPolygons(numTypes = Ntypes) if (interactive()) { clearPlot() Plot(ras) } # Use numPerPatchTable patchDT <- data.table(pops = 1:Ntypes, num.in.pop = c(1, 3, 5, 7)) rasAgents <- specificNumPerPatch(ras, patchDT) rasAgents[is.na(rasAgents)] <- 0 library(testthat)
#> #> Attaching package: ‘testthat’
#> The following object is masked from ‘package:dplyr’: #> #> matches
#> The following objects are masked from ‘package:magrittr’: #> #> equals, is_less_than, not
expect_true(all(unname(table(ras[rasAgents])) == patchDT$num.in.pop)) # Use numPerPatchMap rasPatches <- ras for (i in 1:Ntypes) { rasPatches[rasPatches==i] <- patchDT$num.in.pop[i] } if (interactive()) { clearPlot() Plot(ras, rasPatches) } rasAgents <- specificNumPerPatch(ras, numPerPatchMap = rasPatches) rasAgents[is.na(rasAgents)] <- 0 if (interactive()) { clearPlot() Plot(rasAgents) }